1.Allers, E., L. Gomez-Consarnau, J. Pinhassi, J. M. Gasol, K. Simek, and J. Pernthaler. 2007. Response of Alteromonadaceae and Rhodobacteriaceae to glucose and phosphorus manipulation in marine mesocosms. Environ. Microbiol. 9:2417-2429.

2.Alonso, C. and J. Pernthaler. 2006. Concentration-dependent patterns of leucine incorporation in coastal picoplankton. Appl. Environ. Microbiol. 72:2141-2147.

3.Alonso, C., F. Warnecke, R. Amann, and J. Pernthaler. 2007. High local and global diversity of Flavobacteria in marine plankton. Environ. Microbiol. 9:1253-1266.

4.Amann, R., J. Peplies, and D. Schüler. 2006. Diversity and taxonomy of magnetotactic bacteria. In: Magnetoreception and Magnetosomes in Bacteria, pp. 25-36. D. Schüler (Ed.). Springer-Verlag Berlin Heidelberg.

5.Barberyon, T., F. Carpentier, S. L’Haridon, M. Schüler, G. Michel, and R. Amann. Description of Maribacter forsetii sp. nov., a marine Flavobacteriaceae isolated from the North Sea water, and emended description of the genus Maribacter. Int. J. System. Evol. Microbiol. in press

6.Cypionka, H., H.-D. Babenzien, F. O. Glöckner, and R. Amann. 2006. The genus Nevskia. In: The Prokaryotes. Third Edition. Volume 6: Proteobacteria: Gamma Subclass, pp. 1152-1155. M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer and E. Stackebrandt (Eds.). Springer Sciences+Business Media, LLC.

7.Foti, M., D. Y. Sorokin, B. Lomans, M. Mußmann, E. E. Zacharova, N. V. Pimenov, J. G. Kuenen, and G. Muyzer. 2007. Diversity, activity, and abundance of sulfate-reducing bacteria in saline and hypersaline soda lakes. Appl. Environ. Microbiol. 73:2093-100.

8.Fuchs, B. M., S. Spring, H. Teeling, C. Quast, J. Wulf, M. Schattenhofer, S. Yan, S. Ferriera, J. Johnson, F. O. Glöckner, and R. Amann. 2007. Characterization of a marine gammaproteobacterium capable of aerobic anoxygenic photosynthesis. Proc. Natl. Acad. Sci. 104:2891-2896.

9.Fuchs, B. M., J. Pernthaler, and R. Amann. 2007. Single cell identification by fluorescence in situ hybridization, pp. 886-896. In: Methods for General and Molecular Microbiology, 3rd Edition. C.A. Reddy, T. J. Beveridge, J.A. Breznak, G. Marzluf, T. M. Schmidt, and L. R. Snyder, Eds. ASM Press, Washington D.C.

10.Heywood, J. L., M. V. Zubkov, G. A. Tarran, B. M. Fuchs, and P. M. Holligan. 2006. Prokaryoplankton standing stocks in oligotrophic gyre and equatorial provinces of the Atlantic Ocean: Evaluation of inter-annual variability. Deep Sea Research Part II: Topical Studies in Oceanography 53:1530-1547.

11.Lösekann, T., K. Knittel, T. Nadalig, B. Fuchs, H. Niemann, A. Boetius, and R. Amann. 2007. Diversity and abundance of anerobic and anaerobic methane oxidizers at the Haakon Mosby mud volcano, Barents Sea. Appl. Environ. Microbiol. 73:3348-3362.

12.MacGregor, B. J., H.T.S. Boschker, and R. Amann. 2006. Comparison of rRNA and polar-lipid-derived fatty acid biomarkers for assessing 13C-substrate incorporation by microorganisms in marine sediments. Appl. Environ. Microbiol. 72:5246-5253.

13.MacGregor, B. J., and R. Amann. 2006. Single-stranded conformational polymorphism for separation of mixed rRNAs (rRNA-SSCP), a new method for profiling microbial communities. Syst. Appl. Microbiol. 29:661-670.

14.Mary, I., J. L. Heywood, B. M. Fuchs, R. Amann, G. A. Tarran, P. H. Burkill, and M. V. Zubkov. 2006. SAR11 dominance among metabolically active low nucleic acid bacterioplankton in surface waters along an Atlantic meridional transect. Aquat. Microb. Ecol. 45:107-113.

15.Musat, N., U. Werner, K. Knittel, S. Kolb, T. Dodenhof, J. E. E. van Beusekom, D. De Beer, N. Dubilier, and R. Amann. 2006. Microbial community structure of sandy intertidal sediments in the North Sea, Sylt-Romo Basin, Wadden Sea. Syst. Appl. Microbiol. 29:333-348.

16.Mussmann, M., F. Z. Hu, M. Richter, D. de Beer, A. Preisler, B. B. Jorgensen, M. Huntemann, F. O. Glöckner, R. Amann, W. J. H. Koopman, R. S. Lasken, B. Janto, J. Hogg, P. Stoodley, R. Boissy, and G. D. Ehrlich. 2007. Insights into the genomes of large sulfur bacteria revealed by analysis of single filaments. PLoS Biology 5:1923-1937 (e230).

17.Niemann, H., T. Lösekann, D. de Beer, M. Elvert, T. Nadalig, K. Knittel, R. Amann, E.J. Sauter, M. Schlüter, M. Klages, J. Foucher, and A. Boetius. 2006. Novel microbial communities of the Haakon Mosby mud vulcano and their role as a methane sink. Nature (London) 443:854-858.

18.Prast, M., A. Bischoff, U. Waller, R. Amann, und U.-G. Berninger. Impact of ciliates on nitrification and nitrifying bacteria in Baltic Sea sediments. Marine Ecol. Progress Ser. in press

19.Santos, F., A. Meyerdierks, A. Pena, R. Rossello-Mora, R. Amann, and P. Anton. 2007. Metagenomic approach to the study of halophages: the environmental halophage 1. Environ. Microbiol. 9:1711-1723.

20.Soria-Carrasco, V., M. Valens-Vadell, A. Pena, J. Anton, R. Amann, J. Castresana, and R. Rossello-Mora. 2007. Phylogenetic position of Salinibacter ruber based on concatenated protein alignments. Syst. Appl. Microbiol. 30:171-179.

21.Tujula, N. A., C. Holmström, M. Mußmann, R. Amann, S. Kjelleberg, and G. R. Crocetti. 2006. A CARD-FISH protocol for the identification and enumeration of epiphytic bacteria on marine algae. J. Microbiol. Meth. 65:604-607.

22.Wakeham, S. G., R. Amann, K. H. Freeman, E. C. Hopmans, B. B. Jorgensen, I. F. Putnam, S. Schouten, J. S. Sinninghe Damste, H. M. Talbot, and D. Woebken. Microbial ecology of the stratified water column of the Black Sea as revealed by a comprehensive biomarker study. Organic Geochemistry. in press.

23.Woebken, D., B. M. Fuchs, M. M. M. Kuypers, and R. Amann. 2007. Potential interactions of particle-associated anammox bacteria with bacterial and archaeal partners in the Namibian upwelling system. Appl. Environ. Microbiol. 73:4648-4657.

24.Woebken, D., H. Teeling, P. Wecker, A. Dumitriu, I. Kostadinov, E. F. DeLong, R. Amann, and F. O. Glöckner. 2007. Fosmids of novel marine planctomycetes from the Namibian and Oregon coast upwelling systems and their cross-comparison with planctomycete genomes. ISME J. 1:419-435.

25.Zubkov, M. V., I. Mary, E. M. S. Woodward, P. E. Warwick, B. M. Fuchs, D. J. Scanlan, and P. H. Burkill. 2007. Microbial control of phosphate in the nutrient-depleted North Atlantic subtropical gyre. Env. Microbiol. 9:2079-2089.