Max Planck Institute for Marine Microbiology
Wolfgang Hankeln
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- Wolfgang Hankeln
Address:Wolfgang Hankeln
MPI for Marine Microbiology
Celsiusstr. 1
D-28359 Bremen
Germany
MPI for Marine Microbiology
Celsiusstr. 1
D-28359 Bremen
Germany
Phone:+49 421 2028 - 982
Fax:+49 421 2028 - 560
e-mail:whankeln
mpi-bremen.de
mpi-bremen.deCurriculum Vitae
| (04/2008) - (06/2011) | Doctor of Philosophy in Bioinformatics: Max Planck Institute for Marine Microbiology / Jacobs University Bremen gGmbH |
| (10/2006) - (03/2008) | Master of Science: Marine Microbiology at the Max Planck Institute for Marine Microbiology |
| (10/2000) - (04/2006) | Diploma: Computer Science at the University of Bremen |
Main Research Interests
"To me, bioinformatics has an inherent 'cool factor' because it challenges our approaches to analytics, pushes the envelope on performance, and offers a compelling example for a web services-based industry." - James Gosling
In this spirit I started my studies here at the MPI for Marine Microbiology in 2006 after finishing my studies in computer science. So far, I have been busy with projects focusing on data integration (
www.megx.net), consistent contextual data acquisition (MetaBar and CDinFusion) and the analysis of large scale metagenomic datasets. Furthermore, I have been involved in standards development for biological sequence data (MIxS). For further information, have a look at my publications and posters listed here.
Publications & Proceedings
- MetaBar - a tool for consistent contextual data acquisition and standards compliant submission.
Hankeln, W., Buttigieg, P.L., Fink, D., Kottmann, R., Yilmaz, P., Glöckner, F.O.: BMC Bioinformatics. 2010. - Applying graph theoretic approaches to microbial metagenomes: ecological perspectives on function
Hankeln, W.; Buttigieg, P. L.; Kostadinov, I.; Kottmann, R.; Yilmaz, P.; Duhaime, M. B. & Glöckner, F. O. BCB '10: Proceedings of the First ACM International Conference on Bioinformatics and Computational Biology, ACM, 2010, 478-480 - Megx.net: integrated database resource for marine ecological genomics
Renzo Kottmann, Ivalyo Kostadinov, Melissa Beth Duhaime,Pier Luigi Buttigieg, Pelin Yilmaz, Wolfgang Hankeln, Jost Waldmann, Frank Oliver Glöckner
Nucleic Acid Research, 6 Database Issue, 2009 - Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications
Pelin Yilmaz et al.
Nature Biotechnology Volume: 29, 415–420, 2011 - CDinFusion – Submission-Ready, On-Line Integration of Sequence and Contextual Data
Hankeln, W., Wendel, N.J., Gerken J., Waldmann, J., Buttigieg, P.L., Kostadinov, I., Kottmann, R., Yilmaz, P. & Glöckner F.O.
PLoS ONE. 2011;6(9):e24797. Epub 2011 Sep 13.
