Publikationen 2017

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Martínez-Martínez M, Coscolín C, Santiago G, Chow J, Stogios PJ, Bargiela R, Gertler C, Navarro-Fernández J, Bollinger A, Thies S, Méndez-García C, Popovic A, Brown G, Chernikova TN, García-Moyano A, Bjerga GEK, Pérez-García P, Hai T, Del Pozo MV, Stokke R, Stehen ICH, Cui H, Xu X, Nocek BP, Alcaide M, Distaso M, Mesa V, Peláez AI, Sánchez J, Buchholz PCF, Pleiss J, Fernández-Guerra A, Glöckner FO, Golyshina OV, Yakimov MM, Savchenko A, Jaeger KE, Yakunin AF, Streit WR, Golyshin PN, Guallar V, Ferrer M and The INMARE Consortium (2017) Determinants and Prediction of Esterase Substrate Promiscuity Patterns. ACS Chemical Biology 13(1) pp225-234 (doi: 10.1021/acschembio.7b00996)

Beccati A, Gerken, J, Quast C, Yilmaz P, Glöckner FO (2017) SILVA tree viewer: interactive web browsing of the SILVA phylogenetic guide trees. BMC Bioinformatics 18:433 (doi: 10.1186/s12859-017-1841-3)

Glöckner FO, Yilmaz P, Quast C, Gerken J, Beccati A, Ciuprina A, Bruns G, Yarza P, Peplies J, Westram R, Ludwig W (2017) 25 years of serving the community with ribosomal RNA gene reference databases and tools. Journal of Biotechnology 26, 169–176 (doi: 10.1016/j.jbiotec.2017.06.1198)

Mayer G, Quast C, Felden J, Lange M, Prinz M, Pühler A, Lawerenz C, Scholz U, Glöckner FO, Müller W, Marcus K, Eisenacher M (2017) A generally applicable lightweight method for calculating a value structure for tools and services in bioinformatics infrastructure projects. Briefings in Bioinformatics, 1–7 (doi:10.1093/bib/bbx140)

Dadon-Pilosof A, Conley KR, Jacobi Y, Haber M, Lombard F, Sutherland KR, Steindler L, Tikochinski Y, Richter M, Glöckner FO, Suzuki MT, West NJ, Genin A, Yahel G (2017) Surface properties of SAR11 bacteria facilitate grazing avoidance. Nature Microbiology 2, 1608–1615 (doi:10.1038/s41564-017-0030-5)

Bowers RM, Kyrpides NC, Stepanauskas R, Harmon-Smith M, Doud D, Reddy TBK, Schulz F , Jarett J, Rivers AR, Eloe-Fadrosh E, Tringe SG, Ivanova NN, Copeland A, Clum A, Becraft ED, Malmstrom RR, Birren B, Podar M, Bork P, Weinstock GM, Garrity GM, Dodsworth JA, Yooseph S, Sutton G, Glöckner FO, Gilbert JA, Nelson WC, Hallam SJ, Jungbluth SP,Ettema TJG, Tighe S, Konstantinidis KT, Liu WT, Baker BJ, Rattei T, Eisen JA, Hedlund B, McMahon KD, Fierer N, Knight R, Finn R, Cochrane G, Karsch-Mizrachi I, Tyson GW, Rinke C, The Genome Standards Consortium, Lapidus A, Meyer F, Yilmaz P, Parks DH, Eren AM , Schriml L, Banfield JF, Hugenholtz P, Woyke T (2017) Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. Nature Biotechnology 35 (8) (doi: 10.1038/nbt.3893)

Thiele S, Richter M, Balestra C, Glöckner FO, Casotti R (2017) Taxonomic and functional diversity of a coastal planktonic bacterial community in a river-influenced marine area. Marine Genomics 32, 61–69 (doi: 10.1016/j.margen.2016.12.003)

Meyer JM, Baskaran P, Quast C, Susoy V, Rödelsperger C, Glöckner FO, Sommer RJ (2017) Succession and dynamics of Pristionchus nematodes and their microbiome during decomposition of Oryctes borbonicus on La Reunion Island. Environmental Microbiology 19(4), 1476–1489 (doi: :10.1111/1462-2920.13697)

Berney C, Ciuprina A, Bender S, Brodie J, Edgcomb V, Kim E, Rajan J, Wegener Parfrey L, Adl S, Audic S, Bass D, Caron DA, Cochrane G, Czech L, Dunthorn M, Geisen S , Glöckner FO, Mahe F, Quast C, Kaye JZ, Simpson AGB, Stamatakis A, del Campo J, Yilmaz P, de Vargas C (2017) UniEuk: Time to Speak a Common Language in Protistology! Journal of Eukaryotic Microbiology 64, 407–411 (doi: 10.1111/jeu.12414)

Yarza P, Yilmaz P, Panzer K, Glöckner FO, Reich M (2017) A phylogenetic framework for the kingdom Fungi based on 18S rRNA gene sequences. Marine Genomics (doi: 10.1016/j.margen.2017.05.009)

Rast P, Glöckner I, Boedeker C, Jeske O, Wiegand S, Reinhardt R, Schumann P, Rohde M, Spring S, Glöckner FO, Jogler C, Jogler M (2017) Three Novel Species with Peptidoglycan Cell Walls form the New Genus Lacunisphaera gen. nov. in the Family Opitutaceae of the Verrucomicrobial Subdivision 4. Frontiers in Microbiology 8:202 (doi:10.3389/fmicb.2017.00202)

Zure M, Fernandez-Guerra A, Munn CB, Harder J (2017) Geographic distribution at subspecies resolution level: closely related Rhodopirellula species in European coastal sediments. ISME J 11:478-489 (doi:10.1038/ismej.2016.123)

Thiele S, Richter M, Balestra C, Glöckner FO, Casotti R (2017) Taxonomic and functional diversity of a coastal planktonic bacterial community in a river-influenced marine area. Marine Genomics:online (doi: 10.1016/j.margen.2016.12.003)

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