2012	Ziebis, W., J. McManus, T. Ferdelman, F. Schmidt-Schierhorn, W. Bach, J. Muratli, K.J. Edwards, H. Villinger. 2012. Interstitial fluid chemistry underlying the North Atlantic Gyre and the influence of sub-surface flow. Earth Plant. Sci. Lett. 323-324; 79-91. doi: 10.1016/j.epsl.2012.01.018
2011	Kamyshny Jr., A, AL Zerkle , ZF Mansaray, I Ciglencki I, E Bura-Nakic , J Farquhar TG Ferdelman. 2011. Biogeochemical sulfur cycling in the water column of a shallow stratified sea-water lake: Speciation and quadruple sulfur isotope composition. Marine Chemistry, 127: 144-154 doi:10.1016/j.marchem.2011.09.001
	Holmkvist, L., T.G. Ferdelman, B.B. Jørgensen. 2011. A cryptic sulfur cycle driven by iron in the methane zone of marine sediment (Aarhus Bay, Denmark). Geochimica et Cosmochimica Acta, 75, 3581-3599. doi:10.1016/j.gca.2011.03.033
	Holmkvist, L., A. Kamyshny Jr., C. Vogt, K. Vamvakopoulos, T.G. Ferdelman, B.B. Jørgensen. 2011. Suflate reduction below the sulfate-methan transition in Black Sea sediemnts. Deep-Sea Res. I, 58, 493-504.
	Hoshino, T., Y. Morono, T. Terrada, H. Imachi, T.G. Ferdelman and F. Inagaki. 2011. Comparative study of sub-seafloor microbial community structures in deeply buried coral fossils and sediment matrices from the Challenger mound in the Porcupine Seabight. Frontiers Extreme Microbiol., 2, 231, doi:10.3389/fmicb.2011.00231.
	Picard A. and T.G. Ferdelman. 2011. Linking microbial heterotrophic activity and sediment lithology in oxic, oligotrophic sub-seafloor sediments of the North Atlantic Ocean. Frontiers Extreme Microbiol., 2, 263, doi:10.3389/micb.2011.00263.
	Wehrmann L.M., N. Risgaard-Petersen, H.N. Schrum, E. Walsh, Y. Huh, M. Ikehara, C. Pierre, S. D'Hondt, T.G. Ferdelman, A.C. Ravelo, K. Takahashi, C. Alvarez Zarikian and the Integrated Ocean Drilling Program Expedition 323 Scientific Party. 2011. Coupled organic and inorganic carbon cycling in the deep subseafloor sediment of the northeastern Bering Sea Slope (IODP Exp. 323). Chemical Geology, 284, 251-261.
	Wehrmann, L.M., S.P. Templer, B. Brunner, S.M. Bernasconi, L. Maignien, T.G. Ferdelman. 2011. The imprint of methane seepage on the geochemical record and early diagenetic processes in cold-water coral mounds on Pen Duick Escarpment, Gulf of Cadiz. Marine Geology, 282, 118-137.
2010	Riedinger N, Brunner B, Formolo MJ, Solomon E, Kasten S, Strasser M, and Ferdelman TG. 2010, Oxidative sulfur cycling in the deep biopshere of the Nankai Trough. Geology 38: 851-854.
	Kano A, Ferdelman TG, Williams T. 2010, The Pleistocene cooling built Challenger Mound, a deep-water coral mound in the NE Atlantic: Synthesis from IODP Expedtion 307. The Sedimentary Record, 8, 4-9; doi: 10.2110/sedred.2010.4.
	Goldhammer,T., V. Brüchert, T.G. Ferdelman and M. Zabel. 2010. Microbial sequestration of phosphorus in anoxic upwelling sediments. Nature Geoscience, Advanced Online Publication, 18 July 2010, DOI: 10.1038/NGEO913
	Schwermer CU, Ferdelman TG, Stief P, Gieseke A, Rezakhani N, van Rijn J, deBeer D, Schramm A. 2010. Effect of nitrate on sulfur transformations in sulfidogenic sludge of a marine aquaculture biofilter. FEMS Microbial Ecol. 72: 476-484.
	Kamyshny A, Jr., andFerdelman TG, 2010, Dynamics of zero-valent sulfur species including polysulfides at seep sites on intertidal sand flats (Wadden Sea, North Sea) Marine Chemistry, 121:17-26.
	Riedinger N, Brunner B, Lin Y-S, Vossmeyer A, Ferdelman TG, and Jørgensen BB, 2010, Methane at the sediment-water transition in Black Sea sediments. Chemical Geology, 274: 29-37 doi:10.1016/j.chemgeo.2010.03.010.
2009	Deusner C, Meyer V and Ferdelman TG, 2009, High-pressure systems for gas phase-free continuous incubation of enriched marine microbial communities performing anaerobic oxidation of methane. Biotech. Bioeng., doi. 10.1002.bit.22553.
	Hubert C, Loy A, Nickel M, Arnosti C, Ferdelman T, Baranyi C, Christensen FM, Finster K, Vandieken V, Brüchert V, Jørgensen BB, 2009, A constant flux of diverse thermophilic bacteria into the cold Arctic seabed. Science, 325, 1541-1544.
	Fischer JP, Ferdelman TG, D’Hondt S, Røy H, Wenzhöfer F, 2009, Oxygen penetration deep into the sediment of the South Pacific gyre. Biogeosciences 6, 1467-1478. www.biogeosciences.net/6/1467/2009
	D’Hondt S, Spivack A, Polckalny R, Ferdelman T, Fischer J, Kallmeyer J, Abrams L, Smith D, Graham D, Hasiuk F, Schrum H, Stancin A, 2009, Subseafloor sedimentary life in the South Pacific Gyre. Proc. Nat. Acad. Sci., 106, 11651-116566, doi:10.1073/pnas.o811793106..
	Wehrmann LM, Knab NJ, Pirlet H., Unnithan V, Wild C, Ferdelman TG, 2009. Carbon mineralization and carbonate preservation in modern cold-water coral reef sediments on the Norwegian shelf. Biogeosciences 6, 1-18.
	Emeis K-C, Struck U, Leipe T, Ferdelman TG, 2009. Variability in upwelling intensity and nutrient regime in the coastal upwelling system offshore Namibia: results from sediment archives. Int. J. Earth Sci 98: 309-326.
	Kamyshny A, Borkenstein CG, Ferdelman TG. 2009. Protocol for quantitative detetection of elemental sulfur and polysulfide zero-valency sulfur distribution in natural aquatic samples. Geostand. Geoanal. Res., 33, doi: 10.1111/j.1751-908X.2009.00907.x.
	Webster G, Blazejak A, Cragg BA, Schippers A, Sass H, Rinna J, Tang X, Mathes F, Ferdelman, TG, Fry JC, Weightman AJ, and Parkes RJ, 2008. Subsurface microbiology and biogeochemistry of a deep, cold-wate carbonate mound from the Porcupine Seabight (IODP Expedition 307). Environmental Microbiology. 11, 239-257 doi: 10.1111/j.1462-2920.2008.01759.x.
2008	Schwermer CU, Lavik G, Abed RMM., Dunsmore B, Ferdelman TG, Stoodley P, Gieseke A., de Beer D. 2008. Impact of nitrate on the structure and function of bacterial biofilm communities in pipelines used for injection of seawater into oil fields. Appl.& Environ. Microbiol. 74:2841-285.
2007	Schaefer H, Ferdelman TG, Fossing H, and Muyzer G. 2007. Microbial diversity in the deep sediments of the Benguela Upwelling System. Aquatic Microbial Ecology, 50; 1-9; doi: 10.3354/ame01164.
	Kano A, Ferdelman TG, WilliamsT, Henriet JP, Ishikawa T, Kawagoe N, Takashima C, Kakizaki Y, Abe K, Sakai S, Browning EL, Li X & IODP Expedition 307 Scientists. 2007. Age constraints on the origin and growth history of a deep-water coral mound in NE Atlantic drille during Integrated Ocean Drilling Program Expedition 307. Geology, 35; 1051-1054, doi: 10.1130/G2317A.1.
	Aspetsberger F, Zabel M, Ferdelman T, Struck U, Mackensen A, Ahke A, and Witte U. 2007. Instantaneous benthic response to differect organic matter quality: In situ experiments in the Benguela Upwelling System. Mar. Biol. Res., Marine Biology Research, 3:342-356.
	Niggemann J, Ferdelman TG, Lomstein BA, Kallmeyer J, and Schubert CJ. 2007. How depositional conditions control input, composition, and degradation of organic matter in sediments from the Chilean coastal upwelling region. Geochim. Cosmochim. Acta 71: 1513-1527.
2006	Ferdelman TG, Kano A, Williams T, Henriet J-P, and the Expedition 307 Scientists. 2006. Proceedings of the Integrated Ocean Drilling Program, Vol. 307: College Station TX (IODP Management Int’l., Inc.). doi: 10.2204/iodp.proc.307.101.2006
	Werner U, Bird P, Wild C, Ferdelman T, Polercky L, Eikert G, Jonstone R, Hoegh-Guldberg O, de Beer D. 2006. Spatial patterns of aerobic and anaerobic mineralization rates and oxygen penetration dynamics in coral reef sediments (Heron Island, Australia). Marine Ecol. Prog. Ser. 309, 93-105
	Williams T, Kano A, Ferdelman TG, Henriet J-P, Abe K, Andres MS, Bjaerager M, Browning EL, Cragg BA, DeMol B, Dorschel B, Foubert A, Frank TD, Fuwa Y, Gaillot P, Gharib JJ, Greg JM, Huvenne VAI, Léonide P, Li X, Mangelsdorf K, Tanaka A., Monteys X, Novosel I, Sakai S., Samarkin VA, Sasaki K, Spivack AJ, Takashima C, Titschack J. 2006. Cold-water coral mounds revealed. EOS, Trans. AGU, 87, 525 & 535-536.
2005	Al-Horani, FA, Ferdelman, T, Al-Moghrabi, SM, and deBeer, D. 2005. Spatial distribution of calcification and photosynthesis in the scleractinian coral Galaxea fascicularis. Coral Reefs, 24, 173-180, doi:10.1007/s00338-004-0461-3.
	Parkes RJ, Webster G, Cragg BA, Weightman AJ, Newberry CJ, Ferdelman TG, Kallmeyer J, Jørgensen BB, Aiello IW, and Fry JC.. 2005. Deep sub-seafloor prokaryotes stimulated at interfaces over geological time. Nature 436, 390-394.
	Schippers A, Neretin LN, Kallmeyer J, Ferdelman TG, Cragg BA, Parkes RJ, and Jørgensen BB. 2005. Prokaryotic cells of the deep sub-seafloor biophsere identified as living bacteria. Nature 433, 861-864.
	Schubert CJ, Niggemann J, Klockgether G., and Ferdelman TG. 2005. Chlorin Index: a new parameter for organic matter freshness in sediments. Geochem. Geophys. Geosystems 6(3), doi: 10.1029/2004GC000837.
2004	de Beer D, Wenzhöfer, F, Ferdelman, TG, Boehme, SE, Huettel, M, van Beusekom, JEE, Böttcher, M, Musat, N, and Dubilier N. 2004. Transport and mineralization rates in North Sea sandy intertidal sediments, Sylt-Rømø Basin, Waddensea. Limnol. Oceanogr. 50(1), 113-127.
	D’Hondt, SD, Jørgensen BB, Miller DJ, Batzke A, Blake R, Cragg BA, Cypionka H, Dickens GR, Ferdelman T, Hinrichs K-H, Holm NG, Mitterer R, Spivack A, Wang G, Bekins B, Engelen B, Ford K, Gettemy G, Rutherford SD, Sass H, Skilbeck CG, Aiello IW, Guerin G, House C, Inagak, F, Meister P, Naehr T, Niitsuma S, Parkes RJ, Schippers A, Smith DC, Teske A, Wiegel J, Naranjo Padillo C, and Solis Acosta JL. 2004 Distributions of microbial activities in deep subseafloor sediments. Science, 306, 2216-2221.
	Emeis K-C, Brüchert V, Currie B, Endler R, Ferdelman ‚T, Kiessling A, Leipe T, Noli-Peard K, Struck U, and Vogt T. 2004. Shallow gas in shelf sediments of the Namibian Coastal Upwelling Ecosystem. Cont. Shelf Sci., 24, 627-642.
2003	D'Hondt, S.L., B.B. Jørgensen, D.J. Miller et al [Ferdelman]. 2003. Controls on microbial communities in deeply buried sediments, Eastern Equatorial Pacific and Peru Margin, Sites 1225-1231. Proc. ODP, Init. Repts. 201 [CD-ROM]. Website: http://www-odp.tamu.edu/publications/201_IR/201ir.htm
2001	Dubilier, N., C. Mülders, T. Ferdelman, D. deBeer, A. Pernthaler, M. Klein, M. Wagner, C. Erseus, F. Thiermann, J. Krieger, O. Giere, R. Amann (2001) Endosymbiotic sulphate-reducing and sulphide-oxidizing bacteria in a gutless marine worm (Oligochaeta, Annelida). Nature, 411, 298-302.
	Zopfi, J., T. Ferdelman, B.B. Jørgensen, A. Teske, and B. Thamdrup (2001) Influence of water column dynamics on sulfide oxidation and other major biogeochemical processes in the chemocline of Mariager Fjord (Denmark). Marine Chem., 74, 29-51.
2000	Boetius, A, Ferdelman T., Lochte K. (2000) Bacterial turnover of organic carbon in sediments of the deep Arabian Sea in relation to vertical flux. Deep-Sea Research, II 47, 2835-2875.
	Schubert, C.J., T.G. Ferdelman, and B. Strotmann (2000) Organic matter composition and sulfate reduction rates in sediments off Chile. Organic Geochem., 31, 351-361.
	Fossing H., T.G. Ferdelman, and P. Berg (2000) Sulfate reduction and methane oxidation in continental margin sediments influenced by irrigation (South-East Atlantic off Namibia). Geochim. Cosmochim. Acta, 64, 897-910.
1999	Schulz, H.N., T. Brinkhoff, T.G. Ferdelman, M. Hernandez Marine, A. Teske, and B.B. Jørgensen (1999) Dense populations of a giant sulfur bacterium in Namibian shelf sediments. Science, 284, 493-495.
1998	Ferdelman T.G., Fossing, H., Neumann, K., Schulz, H.D. (1998) Sulfate reduction in surface sediments of the south-east Atlantic continental margin between 15º 38' S and 27º 57'S (Angola and Namibia). Limnol Oceanogr., 44, 650-661.
	Santegoeds C.M., Ferdelman T.G., Muyzer, G. and De Beer D. (1998) Structural and furnctional dynamics of sulfate-reducing bacterium populations in biofilms. Appl. Environmental Microbiol., 64, 3731-3739.
1997	Ferdelman T.G., Lee C., Pantoja S., Harder J., Bebout, B.M. and Fossing H. (1997) Sulfate reduction and methanogenesis in a Thioploca-dominated sediment off the coast of Chile. Geochim. Cosmochim. Acta 61, 3065-3079.
1996	Thamdrup B., Canfield D.E., Ferdelman T.G., Glud R.N. and Gundersen, J.K. (1996) A biogeochemical survey of the anoxic basin Golfo Dulce, Costa Rica. Revista Biol. Trop. 44, Suppl. 3, 19-33.
	Church T.M., Sarin M.M., Fleisher M.Q. and Ferdelman T.G. (1996) Salt marshes: an important coastal sink for dissolved uranium. Geochim. Cosmochim. Acta., 60, 3879-3887.
	Gawarkiewicz G., Ferdelman T.G., Church T.M. and Luther G.W., III (1996) Shelfbreak frontal structure on the continental shelf north of Cape Hatteras. Cont. Shelf Res. 14, 1751-1773.
	Ramsing N.B., Fossing H., Ferdelman T.G., Andersen F. and Thamdrup B. (1996) Distribution of bacterial populations in a stratified fjord (Mariager Fjord, Denmark) quantified by in situ hybridization and related to chemical gradients in the water column. Appl. Env. Microbiol. 62, 1391-1404.
1995	Vairavamurthy M.A., Wang S., Khandewal B., Manowitz B., Ferdelman T. and Fossing H. (1995) Sulfur transformation in early diagenetic sediments from the Bay of Concepcion, off Chile. In Geochemical Transformations of Sedimentary Sulfur, ACS Symposium Series 612, 38-58.
	Hussain N., Ferdelman T.G., Church T.M. and Luther, G.W., III. (1995). Bio-volatilization of polonium: results from laboratory analysis. Aquatic Geochem. 1, 175-188.
1994	Church T.M., Hussain N., Ferdelman T.G. and Fowler S.W. (1994) An efficient quantitative technique for the simultaneous analyses of radon daughters 210Pb, 210Bi and 210Po. Talanta, 41, 243-249.
1993	Green W.J., Canfield D.E., Yu S., Chave K.E., Ferdelman T.G. and Delanois G. (1993) Metal transport and release processes in Lake Vanda: the role of metal oxides. In, Green W.J. and Friedman I.J. (eds.), Physical and Biogeochemical Processes in Antarctic Lakes, Antarctic Research Series, 59, 145-163.
	Luther G.W.,III, and Ferdelman T.G. (1993) Voltammetric characterization of iron (II) sulfide complexes in laboratory solutions and in marine waters and porewaters. Env. Sci. & Tech., 27, 1154-1163.
1992	Gawarkiewicz G., Church T.M., Luther G.W., III, Ferdelman T.G. and Caruso, M. (1992) Large-scale penetration of Gulf Stream water onto the continental shelf north of Cape Hatteras. Geophys. Res. Letters, 19, 373-376.
1991	Luther, G.W., III, Ferdelman T.G., Kostka J.E., Tsamakis E.J. and Church, T.M. (1991) Temporal and spatial variability of reduced sulfur species (FeS2, S2O32) and porewater parameters in salt marsh sediments. Biogeochem. 14, 57-88.
	Ferdelman T.G., Church, T.M. and Luther, G.W., III (1991) Sulfur enrichment of humic substances in a Delaware salt marsh sediment core. Geochim. Cosmochim. Acta 59, 979-988.
	Luther G.W., III, Ferdelman T., Culberson C.H., Kostka J. and Wu J.-F. (1991) Iodine chemistry in the water column of the Chesapeake Bay: evidence for organic iodide forms. Est. Coast. Shelf Sci., 52, 267-279.
1989	Green W.J., Ferdelman, T.G. and Canfield D.E. (1989) Metal dynamics in Lake Vanda (Wright Valley, Antarctica). Chem. Geol. 76, 85-94.
	Green W.J., Gardner T.J., Ferdelman T.G., Angle M.P., Varner L.C., and Nixon, P. (1989) Geochemical processes in the Lake Fryxell basin (Victoria Land, Antarctica). Hydrobiol. 172, 129-148.
1988	Luther G.W., III, Ferdelman T. and Tsmaskis, E. (1988) Evidence suggesting anaerobic oxidation of the bisulfide ion in Chesapeake Bay. Estuaries 11, 281-285.
1986	Green W.J., Ferdelman T.G., Gardner T.J,. Varner L.C. and Angle M.P. (1986) Residence times of eight trace metals in a closed-basin Antarctic lake: Lake Hoare. Hydrobiol. 143, 249-255.
1984	Canfield D.E., Green W.J., Gardner T.J. and Ferdelman T. (1984) Elemental residence times in Acton Lake, Ohio. Arch. Hydrobiol. 100, 501-519.