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- Publications 2019
Publications 2019
| Amann, R.I., S. Baichoo, B.J. Blencowe, P. Bork, M. Borodovsky, C. Brooksbank, P.S.G. Chain, R.R. Colwell, D.G. Daffonchio, A. Danchin, V. de Lorenzo, P.C. Dorrestein, R.D. Finn, C.M. Fraser, J.A. Gilbert, S.J. Hallam, P. Hugenholtz, J.P.A. Ioannidis, J.K. Jansson, J.F. Kim, H.-P. Klenk, M.G. Klotz, R. Knight, K.T. Konstantinidis, N.C. Kyrpides, C.E. Mason, A.C. McHardy, F. Meyer, C.A. Ouzounis, A.A.N. Patrinos, M. Podar, K.S. Pollard, J. Ravel, A. Reyes Muñoz, R.J. Roberts, R. Rosselló-Móra, S.-A. Sansone, P.D. Schloss, L.M. Schriml, J.C. Setubal, R. Sorek, R.L. Stevens, J.M. Tiedje, A. Turjanski, G.W. Tyson, D.W. Ussery, G.M. Weinstock, O. White, W.B. Whitman, I. Xenarios. (2019). Towards unrestricted use of public genomic data. Science 363:350-2. (doi:10.1126/science.aaw1280). |
| Amann, R.. (2019). Das Frühjahrsmikrobiom der südlichen Nordsee: Bacterioplankton-Sukzessionen und bakterielle Polysaccharidverwertung in einem Küstenmeer. In: Die unbekannte Welt der Mikrobiome - Rundgespräche Forum Ökologie, pp. 31-41. Bayrische Akademie der Wissenschaften (Eds.) Verlag Dr. Pfeil, München, Germany. |
| Fischer, T., M. Schorb, G. Reintjes, A. Kolovou, R. Santarella-Mellwig, S. Markert, E. Rhiel, S. Littmann, D. Becher, T. Schweder, and J. Harder. (2019). Biopearling of interconnected outer membrane vesicle chains by a marine flavobacterium. Appl. Environ. Microbiol. 85:e00829-19. (doi:10.1128/AEM.00829-19). |
| Francis, T.B., K. Krüger, B.M. Fuchs, H. Teeling, and R.I. Amann. (2019). Candidatus Prosiliicoccus vernus, a spring phytoplankton bloom associated member of the Flavobacteriaceae. Syst. Appl. Microbiol. 42:41-53. (doi:10.1016/j.syapm.2018.08.007). |
| Hehemann, J.H., G. Reintjes, L. Klassen, A.D. Smith, D. Ndeh, C. Arnosti, R. Amann, D.W. Abbott. (2019). Single cell fluorescence imaging of glycan uptake by intestinal bacteria. ISME J. 13:1883-89. (doi:10.1038/s41396-019-0406-z) |
| Kappelmann, L., K. Krüger, J.H. Hehemann, J. Harder, S. Markert, F. Unfried, D. Becher, N. Shapiro, T. Schweder, R.I. Amann, and H. Teeling. (2019). Polysaccharide utilization loci of North Sea Flavobacteriia as basis for using SusC/D-protein expression for predicting major phytoplankton glycans. ISME J. 13:76-91. (doi:10.1038/s41396-018-0242-6). |
| Knittel, K., G. Wegener, A. Boetius (2019). Anaerobic methane oxidizers. In: T. McGenity (ed.), Microbial communities utilizing hydrocarbons and lipids: members, metagenomics and ecophysiology, Handbook of Hydrocarbon and Lipid Microbiology, Springer Nature Switzerland, chapter 7, pp. 113-132. (doi.org/10.1007/978-3-030-14785-3_7). |
| Krüger K., M. Chafee, T. Ben Francis, T.G. del Rio, D. Becher, T. Schweder, R.I. Amann, H. Teeling. (2019). In marine Bacteroidetes the bulk of glycan degradation during algae blooms is mediated by few clades using a restricted set of genes. ISME J. 13:2800-16. (doi:10.1038/s41396-019-0476-y). |
| Laso-Pérez, R., C. Hahn, D.M. van Vliet, H.E. Tegetmeyer, F. Schubotz, N.T. Smit, T. Pape, H. Sahling, G. Bohrmann, A. Boetius, K. Knittel, and G. Wegener (2019). Anaerobic Degradation of Non-Methane Alkanes by “Candidatus Methanoliparia” in Hydrocarbon Seeps of the Gulf of Mexico. mbio 10: e01814-19. (10.1128/mBio.01814-19). |
| Meier, D.V., P. Pjevac, W. Bach, S. Markert, T. Schweder, J. Jamieson, S. Petersen, R. Amann, and A. Meyerdierks. (2019). Microbial metal-sulfide oxidation in inactive hydrothermal vent chimneys suggested by metagenomic and metaproteomic analyses. Environ. Microbiol. [Epub ahead of print].(doi:10.1111/1462-2920.14514). |
| Orellana, L.H., T.B. Francis, K. Krüger, H. Teeling, M.-C. Müller, B.M. Fuchs, K.T. Konstantinidis, and R.I. Amann. (2019). Niche differentiation among annually recurrent coastal Marine Group II Euryarchaeota. ISME J. (doi.org/10.1038/s41396-019-0491-z). |
| Pjevac, P., S. Dyksma, T. Goldhammer, I. Mujakic, M. Koblizek, M. Mussmann, R. Amann, S. Orlic. (2019). In situ abundance and carbon fixation activity of distinct anoxygenic phototrophs in the stratified seawater lake Rogoznica. Environ. Micriobiol. 21:3896-908. (doi:10.1111/1462-2920.14739). |
| Puentes-Cala, E., and J. Harder. (2019). An RND transporter in the monoterpene metabolism of Castellaniella defragrans. Biodegradation. 30:1-12. (doi:10.1007/s10532-018-9857-6 ). |
| Ramirez, A.S., O.M. Vega-Orellana, T. Viver, J.B. Poveda, R.S. Rosales, C.G. Poveda, J. Spergser, M.P. Szostak, M.J. Caballero, L. Ressel, J.M. Bradbury, M.M. Tavio, S. Karthikeyan, R. Amann, K.T. Konstantinidis, R. Rossello-Mora. (2019). First description of two moderately halophilic and psychrotolerant Mycoplasma species isolated from cephalopods and proposal of Mycoplasma marinum sp. nov. and Mycoplasma todarodis sp. nov. Syst. Appl. Microbiol. 42:457-67. (doi:10.1016/j.syapm.2019.04.003). |
| Reintjes, G., C. Arnosti, B. Fuchs, R. Amann. (2019). Selfish, sharing and scavenging bacteria in the Atlantic Ocean: a biogeographical study of bacterial substrate utilisation. ISME J. 13:1119-32. (doi:10.1038/s41396-018-0326-3). |
| Reintjes, G., H.E. Tegetmeyer, M. Bürgisser, S. Orlić, I. Tews, M. Zubkov, D. Voß, O. Zielinski, C. Quast, F.O. Glöckner, R. Amann, T.G. Ferdelman, B.M. Fuchs. (2019). On site analysis of bacterial communities of the ultra-oligotrophic South Pacific Gyre. Appl. Environ. Microbiol. 85(14). (doi:10.1128/AEM.00184-19). |
| Ruff, S.E., J. Felden, H.R. Gruber-Vodicka, Y. Marcon, K. Knittel, A. Ramette, and A. Boetius. (2019). In situ development of a methanotrophic microbiome in deep-sea sediments. ISME J. 13:197-213. (doi:10.1038/s41396-018-0263-1). |
| Schada von Borzyskowski, L., F. Severi, K. Krüger, L. Hermann, A. Gilardet, F. Sippel, B. Pommerenke, P. Claus, N.S. Cortina, T. Glatter, S. Zauner, J. Zarzycki, B.M. Fuchs, E. Bremer, U.G. Maier, R.I. Amann, T.J. Erb. (2019). Marine Proteobacteria metabolize glycolate via the beta-hydroxyaspartate cycle. Nature. 575:500-4. (doi:10.1038/s41586-019-1748-4). |
| Viver, T., L.H. Orellana, S. Diaz, M. Urdiain, M.D. Ramos-Barbero, J.E. Gonzalez-Pastor, A. Oren, J.K. Hatt, R. Amann, J. Anton, K.T. Konstantinidis, R. Rossello-Mora. (2019). Predominance of deterministic microbial community dynamics in salterns exposed to different light intensities. Environ. Micriobiol. 21:4300-15. (doi:10.1111/1462-2920.14790). |