Publikationen

2020

Viver T, Conrad RE, Orellana LH, Urdiain M, González-Pastor JE, Hatt JK, Amann R, Antón J, Konstantinidis KT, Roselló-Mora, R. Distinct ecotypes within a natural haloarchaeal population enable adaptation to changing environmental conditions without causing population sweeps. ISME J. 2020

Grieb A, Francis TB, Krüger K, Orellana LH, Amann R, Fuchs BM. Candidatus Abditibacter, a novel genus within the Cryomorphaceae, thriving in the North Sea. Syst Appl Microbiol. 2020; 43.

Suttner B, Johnston ER, Orellana LH, Rodriguez-R LM, Hatt JK, Carychao D, Carter MQ, Cooley MB, Konstantinidis KT. Metagenomics as a public health risk assessment tool in a study of natural creek sediments influenced by agricultural and livestock runoff: potential and limitations. Environ Microbiol. 2020; 86 (6).

2019

Orellana LH, Hatt, JK, Iyer R, Chourey K, Hettich RL, Spain JC, Yang WH, Chee-Sanford JC, Sanford RA, Löffler FE, Konstantinidis KT. Comparing DNA, RNA and protein levels for measuring microbial dynamics in soil microcosms amended with nitrogen fertilizer. Sci Rep. 2019; 9: 17630

Viver T., Orellana LH, Díaz S, Urdiain M, Ramos ‐ Barbero MD, González ‐ Pastor, JE, Oren A, Hatt JK, Amann RI, Antón J, Konstantinidis KT, Roselló-Mora R. Predominance of deterministic microbial community dynamics in salterns exposed to different light intensities. Environmental microbiology. 2019; 21 (11): 4300-4315.

Orellana LH, Francis TB, Krüger K, Teeling H, Müller MC, Fuchs BM, Konstantinidis KT, Amann RI. Niche differentiation among annually recurrent coastal Marine Group II Euryarchaeota. ISME J. 2019; 13: 3024-3036

2018

Viver T, Orellana LH, Gonzalez-Torres P, Diaz S, Urdiain M, Farias ME, et al. Genomic comparison between members of the Salinibacteraceae family, and description of a new species of Salinibacter (Salinibacter altiplanensis sp. nov.) isolated from high altitude hypersaline environments of the Argentinian Altiplano. Syst Appl Microbiol. 2018;41(3):198-212.

Cardenas E, Orellana LH, Konstantinidis KT, Mohn WW. Effects of timber harvesting on the genetic potential for carbon and nitrogen cycling in five North American forest ecozones. Sci Rep. 2018;8(1):3142.

2017

Viver T, Orellana LH, Hatt JK, Urdiain M, Diaz S, Richter M, et al. The low diverse gastric microbiome of the jellyfish Cotylorhiza tuberculata is dominated by four novel taxa. Environ Microbiol. 2017;19(8):3039-58.

Orellana LH, Rodriguez RL, Konstantinidis KT. ROCker: accurate detection and quantification of target genes in short-read metagenomic data sets by modeling sliding-window bitscores. Nucleic Acids Res. 2017;45(3):e14.

Orellana LH, Chee-Sanford JC, Sanford RA, Loffler FE, Konstantinidis KT. Year-round shotgun metagenomes reveal stable microbial communities in agricultural soils and novel ammonia oxidizers responding to fertilization. Appl Environ Microbiol. 2017.

2016

Martinez-Bussenius C, Navarro CA, Orellana L, Paradela A, Jerez CA. Global response of Acidithiobacillus ferrooxidans ATCC 53993 to high concentrations of copper: A quantitative proteomics approach. J Proteomics. 2016;145:37-45.

Higgins SA, Welsh A, Orellana LH, Konstantinidis KT, Chee-Sanford JC, Sanford RA, et al. Detection and Diversity of Fungal Nitric Oxide Reductase Genes (p450nor) in Agricultural Soils. Appl Environ Microbiol. 2016;82(10):2919-28.

2014

Orellana LH, Rodriguez RL, Higgins S, Chee-Sanford JC, Sanford RA, Ritalahti KM, et al. Detecting nitrous oxide reductase (NosZ) genes in soil metagenomes: method development and implications for the nitrogen cycle. MBio. 2014;5(3):e01193-14.

2011

Orellana LH, Jerez CA. A genomic island provides Acidithiobacillus ferrooxidans ATCC 53993 additional copper resistance: a possible competitive advantage. Appl Microbiol Biotechnol. 2011;92(4):761.

2009

Navarro CA, Orellana LH, Mauriaca C, Jerez CA. Transcriptional and functional studies of Acidithiobacillus ferrooxidans genes related to survival in the presence of copper. Appl Environ Microbiol. 2009; 75 (19): 6102-9.