Publications

2022

Solanki V, Krüger K, Crawford CJ, Pardo-Vargas A, Danglad-Flores J, Le Mai Hoang K, Klassen L, Abbott DW, Seeberger PH, Amann RI, Teeling H, Hehemann JH (2022) GH76 family glycoside hydrolase indicates Salegentibacter sp. Hel_I_6 consumes alpha-mannan likely originating from marine fungi. ISME J, in press.

2021

Francis TB, Urich T, Mikolasch A, Teeling H, Amann R (2021) North Sea spring bloom-associated Gammaproteobacteria fill diverse heterotrophic niches. Environ Microbiome, 16:15. PMID: 34404489
Francis TB, Bartosik D, Wünsche C, Sichert A, Hehemann JH, Markert S, Schweder T, Fuchs BM, Teeling H, Amann RI, Becher D (2021) Changing expression patterns of TonB-dependent transporters suggest shifts in polysaccharide consumption over the course of a spring phytoplankton bloom. ISME J, ahead of print, doi: 10.1038/s41396-021-00928-8. PMID: 33649555
Vidal-Melgosa S, Sichert A, Francis TB, Bartosik B, Niggemann J, Wichels A, Willats WGT, Fuchs BM, Teeling H, Becher D, Schweder T, Amann R, Hehemann JH (2021) - Diatom fucan polysaccharide precipitates carbon during algal blooms. Nat Comm, 12: 1150. PMID: 33608542

2020

Avcı B, Krüger K, Fuchs BM, Teeling H, Amann RI (2020) Polysaccharide niche partitioning of distinct Polaribacter clades during North Sea spring algal blooms. ISME J, 14(6): 1369-83. PMID: 32071394
Munoz R, Teeling H, Amann R, Rosselló-Móra R (2020) Ancestry and adaptive radiation of Bacteroidetes as assessed by comparative genomics. Syst Appl Microbiol, 13(2): 126065. PMID: 32057584

2019

Orellana LH, Francis TB, Krüger K, Teeling H, Müller MC, Fuchs BM, Konstantinidis KT, Amann R (2019) Niche Differentiation among Anually Recurrent Coastal Marine Group II Euryarchaeota. ISME J, 13: 3024-36. PMID: 31447484
Krüger K, Chafee M, Francis TB, Glavina del Rio T, Becher D, Schweder T, Amann RI, Teeling H (2019) In marine Bacteroidetes the bulk of glycan degradation during algae blooms is mediated by a few clades using a restricted set of genes. ISME J, 13(1): 2800-16. PMID: 31316134
Francis TB, Krüger K, Glavina del Rio T, Fuchs BM, Teeling H, Amann RI (2019) Candidatus Prosiliicoccus vernus, a spring phytoplankton bloom associated member of the Flavobacteriaceae. Syst Appl Microbiol, 42(1):41-53. PMID: 30193855
Kappelmann L, Krüger K, Hehemann JH, Harder J, Markert S, Unfried F, Becher D, Shapiro N, Schweder T, Amann RI, Teeling H (2019) Polysaccharide utilization loci of North Sea Flavobacteriia as basis for using SusC/D-protein expression for predicting major phytoplankton glycans. ISME J, 13(1): 76-91. PMID: 30111868

2018

Matallana-Surget S, Werner J, Wattiez R, Lebaron K, Intertaglia L, Regan C, Morris J, Teeling H, Ferrer M, Golyshin PN, Gerogiorgis D, Reilly SI, Lebaron P (2018). Proteogenomic analysis of Epibacterium mobile BBCC367, a relevant marine bacterium isolated from the south Pacific Ocean. Front Microbiol, 9: 3125. PMID: 30622520
Unfried F, Becker S, Craig SR, Hehemann JH, Markert S, Heiden SE, Hinzke T, Becher D, Reintjes G, Krüger K, Avci B, Kappelmann L, Hahnke RL, Fischer T, Harder J, Teeling H, Fuchs B, Barbeyron T, Amann RI, Schweder T (2018) Hyper-specialzed Bacteroidetes prevail during microalgal blooms. ISME J, 12(12): 2894-906. PMID: 30061707
Chen J, Robb C, Unfried F, Kappelmann L, Markert S, Song T, Harder J, Becher D, Xie P, Amann R, Hehemann JH, Schweder T, Teeling H (2018) Alpha- and beta-mannan utilization by marine Bacteroidetes. Environ Microbiol,. 20(11): 4127-40. PMID: 30246424
Chafee M, Fernàndez-Guerra A, Buttigieg PL, Gerdts G, Eren AM, Teeling H, Amann RI (2018) Recurrent patterns of microdiversity in a temperate coastal marine environment. ISME J, 12: 237-52. PMID: 29064479

2017

Avcı B, Hahnke RL, Chafee M, Fischer T, Gruber-Vodicka H, Tegetmeyer H, Harder J, Fuchs BM, Amann RI, Teeling H (2017) Genomic and physiological analyses of ‘Reinekea forsetii’ reveal a versatile opportunistic lifestyle during spring algae blooms. Environ Microbiol 19: 1209-21. PMID: 28000419

2016

Barbeyron T, Thomas F, Barbe V, Teeling H, Schenowitz C, Dossat C, Goesmann A, Leblanc C, Glöckner FO, Czjzek M, Amann R, Michel G (2016) Habitat and taxon as driving forces of carbohydrate catabolism in marine heterotrophic bacteria: example of the model algae-associated bacterium Zobellia galactanivorans Dsij. Environ Microbiol 18: 4610-27. PMID: 27768819
Bennke CM, Krüger K, Kappelmann L, Huang S, Gobet A, Schüler M, Barbe V, Fuchs BM, Michel G, Teeling H, Amann RI (2016) Polysaccharide Utilization Loci of Bacteroidetes from two contrasting open ocean sites in the North Atlantic. Environ. Microbiol. 18: 4456-70. PMID: 27348854
Teeling H, Fuchs BM, Bennke CM, Krüger K, Chafee M, Kappelmann L, Reintjes G, Waldmann J, Quast C, Glöckner FO, Lucas J, Wichels A, Gerdts G, Wiltshire KH, Amann RI (2016) Recurring patterns in bacterioplankton dynamics during coastal spring algae blooms. eLife, 2016;5: e11888. PMID 27054497

2015

Lucas J, Wichels A, Teeling H, Chafee M, Scharfe M, Gerdts G (2015): Annual dynamics of North Sea bacterioplankton: Seasonal variability superimposes short-term variation. FEMS Microbiol Ecol, 91(9):fiv099. PMID: 26298013
Xing P, Hahnke RL, Unfried F, Markert S, Huang S, Barbeyron T, Harder J, Becher D, Schweder T, Glöckner FO, Amann RI, Teeling H (2015): Niches of two polysaccharide-degrading Polaribacter isolates from the North Sea during a spring diatom bloom. ISME J., 9(6): 1410-22. PMID: 25478683
Hahnke RL, Bennke CM, Fuchs BM, Mann AJ, Riehl E, Teeling H, Amman R, Harder J (2015): Dilution cultivation of marine heterotrophic bacteria abundant after a spring phytoplankton bloom in the North Sea. Environ. Microbiol.,17(10): 3515-26. PMID: 24725270

2014

Klindworth A, Mann AJ, Huang S, Wichels A, Quast C, Waldmann J, Teeling H, Glöckner FO (2014): Diversity and activity of marine bacterioplankton during a diatom bloom in the North Sea assessed by total RNA and pyrotag sequencing. Mar Genomics, 18(Part B): 185-92. PMID: 25211053
Jan C, Petersen JM, Werner J, Teeling H, Huang S, Glöckner FO, Golyshina OV, Dubilier N, Golyshin PN, Jebbar M, Cambon-Bonavita MA (2014): The gill chamber epibiosis of deep-sea shrimp Rimicaris exoculata: an in-depth metagenomic investigation and discovery of Zetaproteobacteria. Environ. Microbiol., 16(9): 2723-38. PMID: 24447589
Werner J, Ferrer M, Michel G, Mann AJ, Huang S, Juarez S, Ciordia S, Albar JP, Alcaide M, La Cono V, Yakimov MM, Antunes A, Taborda M, da Costa MS, Hai T, Glöckner FO, Golyshina OV, Golyshin PN, Teeling H: The MAMBA consortium (2014): Halorhabdus tiamatea: Proteogenomics and glycosidase activity measurements identify the first cultivated euryarchaeon from a deep-sea anoxic brine lake as potential polysaccharide degrader. Environ. Microbiol., 16(8): 2525-37. PMID: 24428220
Kabisch A, Otto A, König S, Becher D, Albrecht D, Schüler M, Teeling H, Amann RI, Schweder T (2014) Functional characterization of polysaccharide utilization loci in the marine Bacteroidetes ‘Gramella forsetii’ KT0803. ISME J., 8(7): 1492-502. PMID: 24522261

2013

Mann AJ, Hahnke RL, Huang S, Werner J, Xing P, Barbeyron T, Huettel B, Stüber K, Reinhardt R, Harder J, Glöckner FO, Amann RI, Teeling H (2013) The genome of the alga-associated marine flavobacterium Formosa agariphila KMM 3901T reveals a broad potential for degradation of algal polysaccharides. Appl. Environ. Microbiol., 79(21): 6813-22. PMID: 23995932
Golyshin PN, Werner J, Chernikova TN, Tran H, Ferrer M, Yakimov MM, Teeling H, Golyshina OV (2013) Genome sequence of Thalassolituus oleivorans MIL-1 (DSM 14913T). Genome Announc., 1(2): e00141-13. PMID: 23599290

2012

Golyshin PN, Leggewie C, Jaeger, KE, Teeling H, Glöckner FO (2012) Biotechnologie aus dem Mittelmeer. Laborwelt 13(03/2012): 18-19. link
Teeling H, Glöckner FO (2012) Current opportunities and challenges in microbial metagenome analysis--a bioinformatic perspective. Brief Bioinform, 13(6): 728-43. PMID: 22966151
Teeling H, Fuchs BM, Becher D, Klockow C, Gardebrecht A, Bennke CM, Kassabgy M, Huang S, Mann AJ, Waldmann J, Weber M, Klindworth A, Otto A, Lange J, Bernhardt J, Reinsch C, Hecker M, Peplies J, Bockelmann FD, Callies U, Gerdts G, Wichels A, Wiltshire KH, Glöckner FO, Schweder T, Amann RI (2012) Substrate-controlled succession of marine bacterioplankton populations induced by a phytoplankton bloom. Science 336(6081): 608-11. PMID: 22556258
Voigt B, Hieu CX, Hempel K, Becher D, Schlüter R, Teeling H, Glöckner FO, Amann R, Hecker M, Schweder T (2012) Cell surface proteome of the marine planctomycete Rhodopirellula baltica. Proteomics 12(11): 1781-91. PMID: 22623273
Kleiner M, Wentrup C, Lott C, Teeling H, Wetzel S, Young J, Chang YJ, Shah M, VerBerkmoes NC, Zarzycki J, Fuchs G, Markert S, Hempel K, Voigt B, Becher D, Liebeke M, Lalk M, Albrecht D, Hecker M, Schweder T, Dubilier N (2012) Metaproteomics of a gutless marine worm and its symbiotic microbial community reveal unusual pathways for carbon and energy use. Proc. Natl. Acad. Sci. U S A 109(19): E1173-82. PMID: 22517752
Grote J, Bruckner CG, Glöckner FO, Jost G, Teeling H, Labrenz M, Jürgens K (2012) Genome and physiology of a model Epsilonproteobacterium responsible for sulfide detoxification in marine oxygen depletion zones. Proc. Natl. Acad. Sci. U S A 109(2): 506-10. PMID: 22203982
Ferrer M, Werner J, Chernikova TN, Bargiela R, Fernández L, La Cono V, Waldmann J, Teeling H, Golyshina OV, Glöckner FO, Yakimov MM, Golyshin PN, the MAMBA Scientific Consortium (2012). Unveiling microbial life in the new deep-sea hypersaline Lake Thetis. Part II: a metagenomic study. Environ. Mircobiol. 14(1): 268-81. PMID: 22040283
Gómez-Pereira PR, Schüler M, Fuchs BM, Bennke C, Teeling H, Waldmann J, Richter M, Barbe V, Bataille E, Glöckner FO, Amann R (2012). Genomic content of uncultured Bacteroidetes from contrasting oceanic provinces in the North Atlantic Ocean. Environ. Microbiol. 14(1): 52-66. PMID: 21895912

2011

Peña A, Teeling H, Huerta-Cepas J, Santos F, Meseguer I, Lucio M, Schmitt-Kopplin P, Dopazo J, Rosselló-Mora R, Schüler M, Glöckner FO, Amann R, Gabaldón T, Antón J (2011). From genomics to microevolution and ecology: the case of Salinibacter ruber. Halophiles and Hypersaline Environments: Current Research and Future Trends, 1st Edition, ISBN 978-3-642-20197-4.
Duhaime MB, Wichels A, Waldmann J, Teeling H, Glöckner FO (2011). Ecogenomics and genome landscapes of marine Pseudoalteromonas phage H105/1. ISME J, 5(1): 107-21. PMID: 20613791
Weber M, Teeling H, Huang S, Waldmann J, Kassabgy M, Fuchs BM, Klindworth A, Klockow C, Wichels A, Gerdts G, Amann R, Glöckner FO (2011). Practical application of self-organizing maps to interrelate biodiversity and functional data in NGS-based metagenomics. ISME J, 5(5): 918-28. PMID: 21160538

2010

Gärdes A, Kaeppel E, Shehzad A, Seebah S, Teeling H, Yarza P, Glöckner FO, Grossart, HP, Ullrich MS (2010). Complete genome sequence of Marinobacter adhaerens type strain (HP15), a diatom-interacting marine microorganism. Stand Genomic Sci3(2): 97-107. PMID: 21304739
Teeling H, Glöckner FO (2010) Integration von Omics-Daten in der marinen Ökosystemforschung. Laborwelt, 11(04/2010): 18-20. link
Peña A, Teeling H, Huerta-Cepas J, Santos F, Yarza P, Brito-Echeverria J, Lucio M, Schmitt-Kopplin P, Meseguer I, Schenowitz C, Dossat C, Barbe V, Dopazo J, Rossello-Mora R, Schüler M, Glöckner FO, Amann R, Gabaldon T, Anton J (2010). Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains. ISME J, 4(7): 882-95. PMID: 20164864
Meyerdierks A, Kube M, Kostadinov I, Teeling H, Glöckner FO, Reinhardt R, Amann R (2010). Metagenome and mRNA expression analyses of anaerobic methanotrophic archaea of the ANME-1 group. Environ Microbiol 12(2): 422-39. PMID: 19878267

2009

Jogler C, Kube M, Schubbe S, Ullrich S, Teeling H, Bazylinski DA, Reinhardt R, Schüler D (2009). Comparative analysis of magnetosome gene clusters in magnetotactic bacteria provides further evidence for horizontal gene transfer. Environ Microbiol11(5): 1267-77. PMID: 19220405

2007

Wöbken D, Teeling H, Wecker P, Dumitriu A, Kostadinov I, Delong EF, Amann R, Glöckner FO (2007). Fosmids of novel marine Planctomycetes from the Namibian and Oregon coast upwelling systems and their cross-comparison with planctomycete genomes. ISME J, 1(5): 419-35. PMID: 18043661
Yutin N, Suzuki MT, Teeling H, Weber M, Venter JC, Rusch DB, Beja O (2007) Assessing diversity and biogeography of aerobic anoxygenic phototrophic bacteria in surface waters of the Atlantic and Pacific Oceans using the Global Ocean Sampling expedition metagenomes. Environ Microbiol, 9(6): 1464-75. PMID: 17504484
Fuchs BM, Spring S, Teeling H, Quast C, Wulf J, Schattenhofer M, Yan S, Ferriera S, Johnson J, Glöckner FO, Amann RI (2007) Whole genome analysis of 'Congregibacter litoralis' strain KT71, the first cultured aerobic gammaproteobacterium capable of anoxygenic photosynthesis. Proc Natl Acad Sci U S A, 104(8): 2891-96. PMID: 17299055

2006

Bauer M, Kube M, Teeling H, Richter M, Lombardot T, Allers E, Würdemann CA, Quast C, Kuhl H, Knaust F, Wöbken D, Bischof K, Mussmann M, Choudhuri JV, Meyer F, Reinhardt R, Amann RI, Glöckner FO (2006) Genome adaptations of the marine Bacteroidetes 'Gramella forsetii' for polymeric organic matter degradation. Environ Microbiol, 8(12): 2201-13. PMID: 17107561
Woyke T, Teeling H, Ivanova NN, Huntemann M, Richter M, Glöckner FO, Boffelli D, Anderson IJ, Barry KW, Shapiro HJ, Szeto E, Kyrpides NC, Mussmann M, Amann RI, Bergin C, Ruehland C, Rubin EM, Dubilier N (2006) Symbiosis insights through metagenomic analysis of a microbial consortium. Nature, 443(7114): 950-5. PMID: 16980956
Teeling, H, Glöckner, FO (2006) RibAlign: a software tool and database for eubacterial phylogeny based on concatenated ribosomal protein subunits. BMC Bioinformatics, 7: 66. PMID: 16476165
Lombardot T, Kottmann R, Pfeffer H, Richter M, Teeling H, Quast C, Glöckner FO (2006) Megx.net - database resource for marine ecological genomics. Nucleic Acids Res, 34(Database issue): 390-3. PMID: 16381894

2005

Lombardot T, Bauer M, Teeling H, Amann R, Glöckner FO (2005). The transcriptional regulator pool of the marine bacterium Rhodopirellula baltica SH 1T as revealed by whole genome comparisons. FEMS Microbiol Lett, 242: 137-45. PMID: 15621430

2004

Bauer M, Lombardot T, Teeling H, Ward NL, Amann RI, Glöckner FO (2004) Archaea-like genes for C1-transfer enzymes in Planctomycetes: phylogenetic implications of their unexpected presence in this phylum. J Mol Evol59(5): 571-86. PMID: 15693614
Teeling H, Waldmann J, Lombardot T, Bauer M, Glöckner FO (2004) TETRA: a web-service and a stand-alone program for the analysis and comparison of tetranucleotide usage patterns in DNA sequences. BMC Bioinformatics, 5: 163. PMID: 15507136
Teeling H, Meyerdierks A, Bauer M, Amann R, Glöckner FO (2004) Application of tetranucleotide frequencies for the assignment of genomic fragments. Environ Microbiol, 6(9): 938-47. PMID: 15305919
Rabus R, Ruepp A, Frickey T, Rattei T, Fartmann B, Stark M, Bauer M, Zibat A, Lombardot T, Becker I, Amann J, Gellner K, Teeling H, Leuschner WD, Glöckner FO, Lupas AN, Amann R, Klenk HP (2004) The genome of Desulfotalea psychrophila, a sulfate-reducing bacterium from permanently cold Arctic sediments. Environ Microbiol, 6(9): 887-902. PMID: 15305914
Teeling H, Lombardot T, Bauer M, Ludwig W, Glöckner FO (2004) Evaluation of the phylogenetic position of the planctomycete 'Rhodopirellula baltica' SH 1 by means of concatenated ribosomal protein sequences, DNA-directed RNA polymerase subunit sequences and whole genome trees. Int J Syst Evol Microbiol, 54(Pt 3): 791-801. PMID: 15143026

2003

Glöckner FO, Kube M, Bauer M, Teeling H, Lombardot T, Ludwig W et al. (2003). Complete genome sequence of the marine planctomycete Pirellula sp. strain 1. Proc Natl Acad Sci U S A, 100: 8298-303. PMID: 12835416

1997

Teeling H, Cypionka H (1997). Microbial degradation of tetraethyl lead in soil monitored by microcalorimetry. Appl Microbiol Biotechnol 48: 275-79. PMID: 9299787
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