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Publications 2021

Zeugner, L.E., K. Krüger, J. Barrero-Canosa, R.I. Amann, and B.M. Fuchs.  (2021). In situ vi­sua­liza­t­i­on of gly­co­si­de hy­dro­la­se fa­mi­ly 92 ge­nes in ma­ri­ne flav­o­bac­te­ria.  ISME Com­mun. 1:81. (doi:10.1038/s43705-021-00082-4)
Francis, B., T. Urich, A. Mikolasch, H. Teeling, and R. Amann. (2021). North Sea spring bloom-as­so­cia­ted Gammaproteobacteria fill di­ver­se he­te­ro­tro­phic ni­ches. Env. Mi­cro­bio­me 16:15. (doi:10.1186/s40793-021-00385-y)
Bru­n­et, M., N. Le Duff, B.M. Fuchs, R. Amann, T. Bar­bey­ron, F. Tho­mas. (2021). Spe­ci­fic de­tec­tion and quan­ti­fi­ca­ti­on of the ma­ri­ne flav­o­bac­te­ri­al ge­nus Zobellia on ma­cro­al­gae using no­vel qPCR and CARD-FISH as­says. Syst. Appl. Mi­cro­bi­ol. 44:126269. (doi:10.1016/j.syapm.2021.126269)
Alejandre-Colomo, C., B. Francis, T. Viver, J. Harder, B.M. Fuchs, R. Rossello-Mora, and R. Amann. (2021). Cul­tiva­ble Winogradskyella spe­cies are ge­no­mi­cal­ly dis­tinct from the sym­pa­tric ab­un­dant can­di­da­te spe­cies. ISME Com­mun. 1:51. (doi:10.1038/s43705-021-00052-w)
Heins, A., R.I. Amann, J. Harder. (2021). Cul­ti­va­ti­on of par­ti­cle-as­so­cia­ted he­te­ro­tro­phic bac­te­ria du­ring a spring phy­to­plank­ton bloom in the North Sea. Syst. Appl. Mi­cro­bi­ol. 44:126232. (doi:10.1016/j.syapm.2021.126232)
Miksch, S., M. Mei­ners, A. Mey­er­dier­ks, D. Pro­bandt, G. We­ge­ner, J. Tit­schack, M.A. Jen­sen, A. Ell­rott, R. Amann and K. Knit­tel. (2021).  Bac­te­ri­al com­mu­nities in tem­pe­ra­te and po­lar co­as­tal sands are sea­so­nal­ly sta­ble. ISME Com­mun. 1:29. (doi:10.1038/s43705-021-00028-w)
Ludwig, W., T. Viver, R. Westram, J.F. Gago, E. Bustos-Caparros, K. Knittel, R. Amann, R. Rossello-Mora. (2021). Re­lease LT­P_12_2020, fea­turing a new ARB ali­gn­ment and im­pro­ved 16S rRNA tree for pro­ka­ryo­tic type strains. Syst. Appl. Mi­cro­bi­ol. 44:126218. (doi:10.1016/j.syapm.2021.126218)
Heins, A., G. Reintjes, R.I. Amann, J. Harder. (2021). Par­ti­cle Collec­tion in Im­hoff Se­di­men­ta­ti­on Co­nes En­ri­ches Both Mo­ti­le Che­mot­ac­tic and Par­ti­cle-At­ta­ched Bac­te­ria. Front. Mi­cro­bi­ol. 12:643730. (doi:10.3389/fmicb.2021.643730)
Viver, T., R.E. Conrad, L.H. Orellana, M. Urdiain, J.E. González-Pastor, J.K. Hatt, R. Amann, J. Anton, K.T. Konstantinidis, R. Rosselló-Móra. (2021). Dis­tinct eco­ty­pes wi­t­hin a na­tu­ral ha­lo­ar­chae­al po­pu­la­ti­on enable ad­ap­ta­ti­on to chan­ging en­vi­ron­men­tal con­di­ti­ons wi­thout cau­sing po­pu­la­ti­on sweeps. ISME J. 15:1178-91. (doi:10.1038/s41396-020-00842-5)
Priest, T., L.H. Orellana, B. Huettel, B.M. Fuchs, R. Amann. (2021). Microbial metagenome-assembled genomes of the Fram Strait from short and long read sequencing platforms. PeerJ 9:e11721. (doi:10.7717/peerj.11721)
Arnosti, C., M. Wietz, T. Brinkhoff, J.H. Hehemann, D. Probandt, L. Zeugner, and R. Amann. (2021). The Bio­geo­che­mis­try of Ma­ri­ne Po­ly­sac­cha­ri­des: Sour­ces, In­ven­to­ries, and Bac­te­ri­al Dri­vers of the Car­bo­hy­dra­te Cy­cle. Ann. Rev. Mar. Sci. 13:81-108. (doi:10.1146/annurev-marine-032020-012810)
Amann, R.I., and F. Aspetsberger. (2021). Sü­ßes Fest­mahl mit meh­re­ren Gän­gen: wie Bak­te­ri­en Al­gen ver­na­schen. BiuZ 51:66-73. (doi:10.11576/biuz-4104)
Francis, T.B., D. Bartosik, T. Sura, A. Sichert, J.H. Hehemann, S. Markert, T. Schweder, B.M. Fuchs, H. Teeling, R.I. Amann, and D. Becher. (2021). Chan­ging ex­pres­si­on pat­terns of TonB-de­pen­dent trans­por­ters sug­gest shifts in po­ly­sac­cha­ri­de con­sump­ti­on over the cour­se of a spring phy­to­plank­ton bloom. ISME J. 15:2336-50. (doi:10.1038/s41396-021-00928-8)
Gründger, F., D. Probandt, K. Knittel, V. Carrier, D. Kalenitchenko, A. Silyakova, P. Serov, B. Ferré, M. Svenning, H. Niemann. (2021). Seasonal shifts of microbial methane oxidation in Arctic shelf waters above gas seeps (Svalbard archipelago). Limnol. Oceanogr. (doi.org/10.1002/lno.11731).
Klassen, L., G. Reintjes, J.P. Tingley, D.R. Jones, J.H. Hehemann, A.D. Smith, T.D. Schwinghamer, C. Arnosti, L. Jin, T.W. Alexander, D. Thomas, R.I. Amann, T.A. McAllister, and D.W. Abbott. (2021). Quan­ti­fy­ing fluo­re­scent gly­can uptake to elu­ci­da­te strain-le­vel va­ria­bi­li­ty in fo­r­a­ging be­ha­vi­ors of ru­men bac­te­ria. Mi­cro­bio­me 9:23. (doi:10.1186/s40168-020-00975-x)
Priest, T., B. Fuchs, R. Amann, and M. Reich. (2021). Di­ver­si­ty and bio­mass dy­na­mics of uni­cel­lu­lar ma­ri­ne fun­gi du­ring a spring phy­to­plank­ton bloom. En­vi­ron. Mi­cro­bi­ol. 23:448-463. (doi:10.1111/1462-2920.15331)
Vaksmaa, A., K. Knittel, A. Abdala, M. Goudriaan, A. Ellrott, H. Witte, I. Vollmer, F. Meirer, C. Lott, M. Weber, H. Niemann. Microbial communities on plastic polymers in the Mediterranean Sea. Front. Microbiol. 12:673553. (doi:10.3389/fmicb.2021.673553)
Vidal-Melgosa, S., A. Sichert, T.B. Francis, D. Bartosik, J. Niggemann, A. Wichels, W.G.T. Willats, B.M. Fuchs, H. Teeling, D. Becher, T. Schweder, R.I. Amann, and J.H. Hehemann. (2021). Dia­tom fu­can po­ly­sac­cha­ri­de pre­ci­pi­ta­tes car­bon du­ring al­gal blooms. Na­tu­re Com­mu­n. 12:1150. (doi:10.1038/s41467-021-21009-6)
Isaac, A., B. Francis, R.I. Amann, S.A. Amin. (2021). Tight Ad­he­rence (Tad) Pi­lus Ge­nes In­di­ca­te Pu­ta­ti­ve Ni­che Dif­fe­ren­tia­ti­on in Phy­to­plank­ton Bloom As­so­cia­ted Rhodobacterales. Front. Mi­cro­bi­ol. 12:718297. (doi:10.3389/fmicb.2021.718297)
Prass, M., M.O. Andreae, A.C. de Araùjo, P. Artaxo, F. Ditas, W. Elbert, J.D. Förster, M.A. Franco, I.H. de Angelis, J. Kesselmeier, T. Klimach, L.A. Kremper, E. Thines, D. Walter, J. Weber, B. Weber, B.M. Fuchs, U. Pöschl, and C. Pöhlker. (2021). Bioaerosols in the Amazon rain forest: temporal variations and vertical profiles of Eukarya, Bacteria, and Archaea. Biogeosciensces 18:4873-87. (doi:10.5194/bg-18-4873-2021)
Klassen, L., X. Xing, J.P. Tingley, K.E. Low, M.L. King, G. Reintjes, D.W. Abbott. (2021). Approaches to Investigate Selective Dietary Polysaccharide Utilization by Human Gut Microbiota at a Functional Level. Front. Microbiol. 12. (doi:10.3389/fmicb.2021.632684)

 

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